A lymph node slice culture model to characterize T cell activation dynamics and anti-viral responses in human tissue

نویسندگان

چکیده

Abstract T cell activation in the lymph node (LN) is critical to initiating adaptive immune responses vaccination, tumors, and infection. We previously demonstrated that cells from human tissue sites (blood, LNs, bone marrow, lung) undergo conserved state transitions during activation. However, these studies were performed suspension culture dissociated tissue, depleting spatial signaling contributions of microenvironment. To address this, we developed techniques for single-cell analysis LN slices, which preserve architecture, local signaling, physiological frequencies. Single-cell RNA-seq (scRNA-seq) matched slice cultures stimulated with anti-CD3/28 antibody tetramers revealed distinct patterns. While stimulation commonly used study activation, this reagent circumvents antigen presentation may not fully recapitulate antigen-mediated signaling. Conversely, antigen-dependent superantigen mimics require MHCII/TCR binding benefit intact microenvironment culture. discovered a metabolic intermediate through scRNA-seq superantigen-stimulated observed stimulation. Overall, demonstrate utility analyzing comparative mechanisms 1T32GM145440-01 (MSTP Training Grant) U19AI128949 (NIAID)

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ژورنال

عنوان ژورنال: Journal of Immunology

سال: 2023

ISSN: ['1550-6606', '0022-1767']

DOI: https://doi.org/10.4049/jimmunol.210.supp.250.11